RT PCR 2017 APR FINAL

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SEPSIS PANEL INFECTIOUS DISEASES (ID)
MENINGOENCEPHALITIS CATALOGUE
RESPIRATORY INFECTION 2017
PYREXIA OF UNKNOWN ORIGIN
SEXUAL TRANSMITTED DISEASE (from Molecular Division)
NEONATAL MENINGITIS
GASTROENTERITIS VERSION 3.0
13.04.2017
A : 12A, Cowley Brown Road, R.S Puram(E), Coimbatore
P : 0422 2540525, 2556628, 2550673 F : 0422 2541316 R
W : www.microlabindia.com
E : [email protected] MICROBIOLOGICAL
T : 1800 425 1316 LABORATORY

SINCE 1977

Alphabetical Index Page Page

A Page Giardia lamblia . . . . . . . . . . . . . . . . . . . . . . . .13 Pan Bacteria . . . . . . . . . . . . . . . . . . . . . . . 11, 12
Group B Streptococcus Pan Fungal . . . . . . . . . . . . . . . . . . . . . . . . . . . 21
Acinetobacter baumannii . . . . . . . . . . . . . . 5, 6 pan CMY+DHA-1 . . . . . . . . . . . . . . . . . . . . . . 6
Acinetobacter spp., . . . . . . . . . . . . . . . . . . . . 16 (S.agalactiae) . . . . . . . . . . . . . . . . . . . .. . 8, 10 pan-SHV . . . . . . . . . . . . . . . . . . . . .. . . . . . . . . 5
Adenovirus . . . . . . . . . . . . . . 10, 12-14, 17, 18, 20 pan-TEM . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5
Aeromonas spp., . . . . . . . . . . . . . . . . . . . . 12, 13 H Pap Smear . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2
Amikacin . . . . . . . . . . . . . . . . . . . . . . . . . . . . .19 Parainfluenza 1 . . . . . . . . . . . . . . . . . . 14, 17, 18
Aspergillus spp., . . . . . . . . . . . . . . . . . . . . . 6, 7 H1N1 . . . . . . . . . . . . . . . . . . . . . . . . 14, 15, 17, 18 Parainfluenza 2 . . . . . . . . . . . . . . . . . . 14, 17, 18
Astrovirus . . . . . . . . . . . . . . . . . . . . . . . . . .12, 13 Haemophilus influenza Parainfluenza 3 . . . . . . . . . . . . . . . . . . 14, 17, 18
Atypical Mycobacteria(MOTT) . . . . . . . . . . .20 Parainfluenza 4 . . . . . . . . . . . . . . . . . .14, 17, 18
type B . . . . . . . . . . . . . . . . . . . . . 13, 16, 17, 18 Parechovirus . . . . . . . . . . . . . . . .9, 10, 14, 17, 18
B Haemophilus Influenzae . . . . . . . . . . 11, 12, 13 Parvovirus B19 . . . . . . . . . . . . . . . . . . . . 2, 3, 10
Haemophilus spp., . . . . . . . . . . . . . . . . . . . . .9 Plasmodium falciparum . . . . . . . . . . . . . . . . .5
Bordetella bronchiseptica . . . . . . . . . . . . . . .15 Hantaan virus . . . . . . . . . . . . . . . . . . . . . . . 3, 5 Plasmodium spp., . . . . . . . . . . . . . . . . . . . . 3,4
Bordetella holmesii . . . . . . . . . . . . . . . . . . . . 15 Hepatitis B Virus (HBV) . . . . . . . . . . . . . 22, 23 Pneumocystis jiroveci . . . . . . . . . .13, 14, 17, 18
Bordetella parapertussis . . . . . . . . . . . . . . . . 15 Hepatitis B Virus (HCV) . . . . . . . . . . . . . . . . 23 Procalcitonin (PCT) . . . . . . . . . . . . . . . . . . 6, 8
Bordetella pertussis. . . . . . . . . . . . . . . . . . . . 15 Hisptoplasma capsulatum . . . . . . . . . . . . . . .21 Proteus mirabilis . . . . . . . . . . . . . . . . . . . . . . .6
Bacteroides spp., . . . . . . . . . . . . . . . . . . . . 6, 7 Herpes Simplex virus 1 Pseudomonas aerugiosa . . . . . . . . . . . . . .6, 16
Beta-lactamase CTX-M
(HSV 1) . . . . . . . . . . . . . . . . . .1, 8, 9, 10, 11, 12 R
Group 1 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 Herpes Simplex virus 2
Beta-lactamase CTX-M Respiratory syncytial virus A . . . . . . . . . . . .16
(HSV 2) . . . . . . . . . . . . . . . . . 1, 8, 9, 10, 11, 12 Respiratory syncytial virus B . . . . . . .. . . . . . 16
Group 9 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 Human Herpes virus 6 Rhinovirus . . . . . . . . . . . . . . . . . . . . . .14, 17, 18
Beta lactamase SHV . . . . . . . . . . . . . . . . . . . . 6 Rickettsia spp., . . . . . . . . . . . . . . . . . . . . . . .3, 4
beta lactamase TEM . . . . . . . . . . . . . . . . . . . . 6 (hHV 6) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3 Rifampicin . . . . . . . . . . . . . . . . . . . . . . 11, 18, 19
BK virus . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 24 Human Herpes virus 6 Rotovirus . . . . . . . . . . . . . . . . . . . . . . . . . . 12, 13
Blastocystis hominis . . . . . . . . . . . . . . . . . . . 13 Rubella virus . . . . . . . . . . . . . . . . . . . . . . . . . .2
Blastomyces dermatidis . . . . . . . . . . . . . . . . .21 (hHV 7) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3
Blood Culture Aerobic . . . . . . . . . . . . . . . . . . 3 Human Immunodeficiency S
Bocavirus . . . . . . . . . . . . . . . . . . .. . . . .14, 17, 18
Bordetella spp., . . . . . . . . . . . . . . . . . .13, 16, 18 Virus Type I (HIV-1) . . . . . . . . . . . . . . . . 24 Salmonella spp., . . . . . . .3, 4, 5, 6, 12, 13, 17, 18
Brucella spp., . . . . . . . . . . . . . . . . . . . . . . . . 3, 4 Human Metapneumovirus A/B . . . . .14, 17, 18 Sapovirus . . . . . . . . . . . . . . . . . . . . . . . . . .12, 13
Burkholderia mallei/ pseudomallei . . . . . .3, 5 Human Papilloma Virus Shigella spp., . . . . . . . . . . . . . . . . . . . . . . . . .13
Staphylococcus spp., . . . . . . . . .. . . . . . . . . 5, 6
C (HPV) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2 Staphylococcus aureus . . . . . . . . . . . . . . . . 5, 6
Streptococcus agalactiae . . . . . . . . . .5, 6, 8, 10
Camphylobacter coli/jejuni. . . . . . . . . . . . . . 12 I Streptococcus
Candida sp. (C.albicans and
Influenza A(flu A) . . . . . . . . . . . . . .14, 15, 17, 18 pneumonia . . . . . . . 3, 4, 6, 9, 11, 12, 13, 16, 17
C. glabrata) . . . . . . . . . . . . . . . . . . . . . . . . 5, 6 Influenza B (flu B) . . . . . . . . . . . . .14, 15, 17, 18
Chikungunya . . . . . . . . . . . . . . . . . . . . . . . . 3, 4 Influenza C(flu C) . . . . . . . . . . . . . .14, 15, 17, 18 T
Chlamydia pneumonia . . . . . . . . . .13, 16, 17, 18 Isoniazid . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19
Chlamydia trachomatis. . . . . . . . . . . 1, 8, 6, 20 Trichosporon mentagrophytes
Clostridium difficile toxin B . . . . . . . . . . . . . 13 J complex . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20
Clostridium difficile . . . . . . . . . . . . . . .. . 12, 13
Coronavirus 229E . . . . . . . . . . . . . . . . 14, 17, 18 Japanese encephalitis virus . . . . . . . . . . . . 3, 5 Trichophyton rubrum complex . . . . . . . . . . .20
Coronavirus HKU1 . . . . . . . . . . . . . . . 14, 17, 18 Trichophyton tonsurans . . . . . . . . . . . . . . . . 20
Coronavirus Nl63 . . . . . . . . . . . . . . . . 14, 17, 18 K Tricholosporum violaceum . . . . . . . . . . . . . .20
Coronavirus Oc43 . . . . . . . . . . . . . . . 14, 17, 18 Toxoplasma gondii . . . . . . . . . . . . . . . . . 2, 5, 6
Coxiella burnetii . . . . . . . . . . . . . . . . . . . . . 3, 4 Kanamycin . . . . . . . . . . . . . . . . . . . . . . . . . . . 19 Treponema pallidum . . . . . . . . . . . . . . . . . . . .1
Cryptococcus neoformans . . . . . . . . . . . . . .5, 6 Klebsiella pneumoniae. . . . . . . . . . . . . . . . .5, 6 Trichomonas vaginalis . . . . . . . . . . . . . . . . . . 1
Cryptosporidium spp., . . . . . . . . . . . . . . . . . .13
CSF Culture . . . . . . . . . . . . . . . . . . . . . .9, 10, 11 L U
CTX-M Group 1 . . . . . . . . . . . . . . . . . . . . . . 5, 6
CTX-M group9 . . . . . . . . . . . . . . . . . . . . . . 5, 6 Legionella spp., . . . . . . . . . . . . . . . .13, 16, 17, 18 Ureaplasma urealyticum/
Cyclospora cayetanensis . . . . . . . . . . . . . . . . 13 Leishmania spp., . . . . . . . . . . . . . . . . . . . . . 3, 5 parvum . . . . . . . . . . . . . . . . . . . . . . . . . . . 1, 8
Cytomegalovirus Leptospira spp., . . . . . . . . . . . . . . . . . . . . . . 3, 4
Listeria monocytogenes . . . . . . . . . . .5, 6, 8, 10 V
(CMV) . . . . . . . . . . .2, 5, 6, 8, 10, 11, 12, 17, 25
M Vancomycin A/B . . . . . . . . . . . . . . . . . . . . . 5, 6
D Varicella Zoaster Virus
Microsporum audouinii . . . . . . . . . . . . . . . . 20
Dengue virus . . . . . . .. . . . . . . . . . . . . . . . . . 3, 4 Microsporum canis. . . . . . . . . . . . . . . . . . . . .20 (VZV) . . . . . . . . . . . . . . 2, 3, 8, 9, 10, 11, 12, 20
Dientamoeba fragilis . . . . . . . . . . . . . . . . . . 13 Microsporum ferrugineum . . . . . . . . . . . . . 20 Vibrio spp., . . . . . . . . . . . . . . . . . . . . . . . . . . . 13
Measles Virus . . . . . . . . . . . . . . . . . . . . . . . . . 3
E mecA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5, 6 W
Methicillin-resistance gene . . . . . . . . . . . . . . 6
Escherichia coli. . . . . . . . . . . . . . . . . . . . . . 5, 6 Moraxella catarrhalis .. . . . . . . . . 13, 16, 17, 18 West Nile virus . . . . . . . . . . . . . . . . . . . . . . . 3, 4
Entamoeba histolytica . . . . . . . . . . . . . . . . . 13 Mumps virus . . . . . . . . . . . . . . . . . . . . . . . . . . 9
Enterobacter spp., . . . . . . . . . . . . . . . . . . . 6, 7 Mycobacterium tuberculosis Y
Enterobacteriaceae . . . . . . . . . . . . . . . . . . . 5, 6
Enterococcus faecalis . . . . . . . . . . . . . . . . 5, 6 complex. . . . . . . . . . . . . . . . . . . . . . 5, 6, 11, 12 Yellow fever virus . . . . . . . . . . . . . . . . . . . . .3, 4
Enterococcus faecium . . . . . . . . . . . . . . . . 5, 6 Mycoplasma genitalium . . . . . . . . . . . . . . . . . 1 Yersinia enterocolitica . . . . . . . . . . . . . . . . . . 13
Enterovirus . . . . . . . 3, 8, 9, 10, 11, 12, 14, 17, 18 Mycoplasma pneumoniae . . . . . . .13, 14, 17, 18
Epstein-barr virus . . . . . . . . . . . . . . . . . . . . . 10
Escherichia coli verotoxin N

positive (VTEC) . . . . . . . . . . . . . . . . . . . . . 12 Neisseria gonorrhoeae . . . . . . . . . . . . . . . . . . .1
Neisseria Meningitis . . . . . . . . . . . . . . 9, 11, 12
G Norovirus G1 . . . . . . . . . . . . . . . . . . . . . . . 12, 13
Norovirus G2 . . . . . . . . . . . . . . . . . . . . . . 12, 13
Gardnerella vaginalis . . . . . . . . . . . . . . . . . . . .1
P

Plasmodium malariae . . . . . . . . . . . . . . . . . . . 5
Plasmodium ovale . . . . . . . . . . . . . . . . . . . . . . 5
Plasmodium vivax . . . . . . . . . . . . . . . . . . . . . . 5

p1 PACKAGE LIST

STD - I (90270)

Principle : Real Time PCR
Specimen : Urethral swab/ Vaginal swab/ Rectal swab/ Urine/ Cervical Scrapings

Pathogens (09) : Chlamydia trachomatis, Neisseria gonorrhoeae,
Mycoplasma genitalium, Trichomonas vaginalis, Gardnerella vaginalis,
Ureaplasma urealyticum/parvum, HSV1, HSV2, Treponema Pallidum

(90297) STD - II

Real Time PCR : Principle
Urine / Cervical Scrapings/ Urethral swab/ Vaginal swab : Specimen

Chlamydia trachomatis, Neisseria gonorrhoeae : (06) Pathogens
Mycoplasma genitalium, HSV1, HSV 2, Treponema pallidum

CHLAMYDIA DNA (09419)

Principle : Real Time PCR
Specimen : Urethral swab/ Vaginal swab/ Rectal swab/ Urine/ Cervical Scrapings

Pathogen (01) : Chlamydiae trachomatis

p2 PACKAGE LIST

GONOCOCCI DNA (09418)

Principle : Real Time PCR
Specimen : Urethral swab/ Vaginal swab/ Rectal swab/ Urine/ Cervical Scrapings

Pathogen (01) : Neisseriae gonorrhoeae

(90313) HPV HR GENOTYPE + THINPREP

Real Time PCR : Principle
Urethral swab/ Vaginal swab/ Rectal swab/ Urine / Cervical Scrapings : Specimen

HPV with 14 High Risk Genotypes , Pap Smear : (16) Pathogens

TORCH Molecular TEST (90314)

Principle : Multiplex Tandem PCR
Specimen : Amniotic Fluid/ Blood/ CSF

Pathogens (07) : Toxoplasma gondii, Varicella Zoaster Virus (VZV),
Cytomegalo Virus (CMV), HSV 2, HSV 1, Parvovirus B19, Rubella virus

p3 PACKAGE LIST

Fever & Rash (90271)

Principle : Real Time PCR
Specimen : CSF/ Blood / Throat swab/ Sputum/ Stools

Pathogens (06) : hHV 6, hHV 7, Parvovirus B19, Enterovirus,
Measles Virus, VZV

(90296) P.U.O - I

Real Time PCR : Principle
Blood(EDTA) / Urine : Specimen

Dengue virus, Rickettsia spp., Salmonella spp., West : (15)Pathogens
Nile virus, Plasmodium spp., Chikungunya, Leptospira spp., Brucella
spp., Streptococcus pneumoniae, Yellow fever virus, Coxiella burnetii,
Burkholderia mallei/ pseudomallei, Hantaan virus, Leishmania spp.,
Japanese encephalitis virus

P.U.O - II (90343)

Principle : Real Time PCR
Specimen : Blood (EDTA)/ Urine

Pathogens (16) : Dengue virus, Rickettsia spp., Salmonella spp.
West Nile virus, Plasmodium spp, Chikungunya, Leptospira spp,
Brucella spp, Streptococcus pneumoniae, Yellow fever virus, Coxiella
burnetii, Burkholderia mallei/ pseudomallei, Hantaan virus,
Leishmania spp, Japanese encephalitis virus, Blood Culture Aerobic

p4 PACKAGE LIST

TROPICAL FEVER -I (90272)

Principle : Real Time PCR
Specimen : Blood (EDTA) / Urine

Pathogens (04) : Dengue virus, Rickettsia spp., Salmonella spp, West
Nile virus

(90273) TROPICAL FEVER - II

Real Time PCR : Principle
Blood(EDTA) / Urine : Specimen

Dengue virus, Rickettsia spp., Salmonella spp., : (07) Pathogens
West Nile virus, Plasmodium spp., Chikungunya, Leptospira spp.

TROPICAL FEVER - III (90274)

Principle : Real Time PCR
Specimen : Blood (EDTA)/ Urine

Pathogens (04) : Brucella spp., Yellow fever virus, Coxiella burnetii
Streptococcus pneumoniae

p5 PACKAGE LIST

TROPICAL FEVER - IV (90275)

Principle : Real Time PCR
Specimen : Blood(EDTA) / Urine

Pathogens (04) : Burkholderia mallei/ pseudomallei, Hantaan virus,
Leishmania spp., Japanese encephalitis virus

(90264) MALARIAL PARASITE PCR

Real Time PCR : Principle
EDTA Blood : Specimen

P.vivax, P.falciparum, P.ovale, P.malariae : (04) Pathogens

SEPSIS - I (90308)

Principle : Multiplex Tandem PCR
Specimen : Blood(EDTA)

Pathogens (34) : E.coli, S.agalactiae, S.aureus, K.pneumoniae,
Enterobacteriaceae, E.faecium, E.faecalis, Staphylococcus spp,
P.aeruginosa, P.mirabilis, A.baumannii, CMV, C.trachomatis, pan (TEM,
SHV) , CTX-M (group1,9), Ureaplasma, Listeria monocytogenes, mecA,
CMY/DHA, KPC, VIM/NDM-1, oxa1, oxa48, Vancomycin A/B, Salmonella
spp., Mpt64, Toxoplasma gondii, Cryptococcus neoformans, Candida sp.

p6 PACKAGE LIST

SEPSIS - II (90342)

Principle : Multiplex Tandem PCR
Specimen : Blood(EDTA) + Serum

Pathogens (35) : E.coli, S.agalactiae, S.aureus, K.pneumoniae,
Enterobacteriaceae, E.faecium, E.faecalis, Staphylococcus spp.,
P.aeruginosa, P.mirabilis, A.baumannii, CMV, C.trachomatis,
Ureaplasma, Listeria monocytogenes, (pan-TEM, SHV), CTX-M
group1, mecA, CMY/DHA, KPC, VIM/NDM-1, oxa (1,48) Vancomycin
A/B, CTX-M group9, Salmonella spp., Mycobacterium tuberculosis
complex, Mycobacterium tuberculosis (Mpt64), Toxoplasma gondii,
Cryptococcus neoformans, Candida sp., Procalcitonin (PCT)

(90396) SEPSIS - III

Multiplex Tandem PCR : Principle
Blood(EDTA) : Specimen

Staphylococcus spp., Staphylococcus aureus, : (37) Pathogens
Streptococcus pneumoniae, Staphylococcus spp, Staphylococcus aureus,
Enterococcus faecalis, Enterococcus faecium, Streptococcus specific gene,

Listeria monocytogenes, Klebsiella pneumoniae, Proteus mirabilis,
Enterobacteriaceae, Pseudomonas aeruginosa, Acinetobacter baumannii,

Ureaplasma, Chlamydia trachomatis (MOMP), Cytomegalovirus,
Vancomycin A/B, oxa 48, oxa 1, E.coli Beta-glucuronidase gene, Beta-
lactamase CTX-M Group 1, VIM/NDM-1, Beta-lactamase CTX-M Group 9,
beta lactamase TEM, Methicillin-resistance gene, Klebsiella pneumoniae

carbapenemase (KPC), pan CMY+DHA-1, Beta lactamase SHV,
Enterobacter spp., Mycobacterium tuberculosis complex, Salmonella spp.,

Aspergillus spp., Candida sp. (C.albicans and C.glabrata), Cryptococcus
neoformans, Toxoplasma gondii, Mycobacterium tuberculosis (Mpt64),

Bacteroides spp.,

p7 PACKAGE LIST (09422)

Aspergillus spp (DNA)

Principle : Real Time PCR
Specimen : Blood(EDTA) / Serum

Pathogen (01) : Aspergillus spp.

(09423) Bacteroides spp(DNA)

Real Time PCR : Principle
Blood(EDTA) /Serum : Specimen

Bacteroides spp., : (01) Pathogen

Enterobacter spp (DNA) (09424)

Principle : Real Time PCR
Specimen : Blood(EDTA) / Serum

Pathogen (01) : Enterobacter spp

p8 PACKAGE LIST

NEONATAL SEPSIS - I (90276)

Principle : Real Time PCR
Specimen : Blood(EDTA) / CSF

Pathogens (07) : Group B Streptococcus (S.agalactiae), Listeria
monocytogenes , Escherichia coli, Staphylococcus aureus, Chlamydia
trachomatis, Cytomegalovirus, Ureaplasma urealyticum/parvum

(90341) NEONATAL SEPSIS - II

Real Time PCR : Principle
CSF /Blood(EDTA) : Specimen

Escherichia coli, Cytomegalovirus : (08) Pathogens
Group B Streptococcus (S.agalactiae), Listeria monocytogenes,

Chlamydia trachomatis, Ureaplasma urealyticum/parvum,
Procalcitonin (PCT), Staphylococcus aureus

VIRAL ENCEPHALITIS (90258)

Principle : Real Time PCR
Specimen : CSF

Pathogens (05) : HSV1, HSV2, VZV, CMV, Enterovirus

p9 PACKAGE LIST

BACTERIAL MENINGITIS - I (90257)

Principle : Real Time PCR
Specimen : CSF

Pathogens (04) : Streptococcus pneumoniae, Neisseria Meningitis,
Haemophilus spp., Pan Bacteria

(90339) BACTERIAL MENINGITIS - II

Real Time PCR : Principle
CSF : Specimen

Streptococcus pneumoniae, Neisseria Meningitis : (05) Pathogens
Haemophilus spp., CSF Culture, Pan Bacteria

VIRAL MENINGITIS (90277)

Principle : Real Time PCR
Specimen : CSF

Pathogens (06) : HSV1, HSV2, VZV, Mumps virus, Enterovirus,
Parechovirus

p10 PACKAGE LIST

VIRAL MENINGITIS PANEL (90306)

Principle : Real Time PCR
Specimen : CSF

Pathogens (10) : HSV1, HSV2, VZV, Enterovirus, Parechovirus,
hHV6, hHV7, CMV, Adenovirus, Epstein-barr virus, Parvovirus B19

(90278) NEONATAL MENINGITIS - I

Real Time PCR : Principle
CSF : Specimen

Group B Streptococcus (S.agalactiae) : (03) Pathogens

Escherichia coli, Listeria monocytogenes

NEONATAL MENINGITIS - II (90340)

Principle : Real Time PCR
Specimen : CSF

Pathogens(04) : Group B Streptococcus (S.agalactiae), CSF Culture
Listeria monocytogenes , Escherichia coli,

p11 PACKAGE LIST

MENINGOENCEPHALITIS - I (90261)

Principle : Real Time PCR
Specimen : CSF

Pathogens (10) : Streptococcus pneumoniae, Neisseria Meningitis,
Haemophilus Influenzae, HSV1, HSV2, VZV, Enterovirus,
Mycobacterium tuberculosis complex, CMV, Pan Bacterium

(90263) MENINGOENCEPHALITIS MTB II

Real Time PCR : Principle
CSF : Specimen

Streptococcus pneumoniae, Neisseria meningitis : (10) Pathogens
CMV, Pan Bacteria, Haemophilus Influenzae, HSV1, HSV2, VZV,
Enterovirus, Mycobacterium tuberculosis complex/Rifampicin

MENINGOENCEPHALITIS - II (90338)

Principle : Real Time PCR
Specimen : CSF

Pathogens (11) : Streptococcus pneumoniae, Neisseria Meningitis,
Haemophilus Influenzae, HSV1, HSV2, VZV, Enterovirus,
Mycobacterium tuberculosis complex, CMV, CSF Culture, Pan
Bacterium

p12 PACKAGE LIST

MENINGOENCEPHALITIS PLUS (90345)

Principle : Real Time PCR
Specimen : CSF

Pathogens (12) : Streptococcus pneumoniae, Neisseria meningitis
Mycobacterium tuberculosis complex, Haemophilus influenzae,
HSV1, HSV2, VZV, Cryptococcus DNA-PCR, Plasmodium falciparum,
Enterovirus, CMV, Toxoplasma gondii, Pan Bacterium

(90279/ 90349) GASTROENTERITIS -BACTERIAL

Real Time PCR : Principle
Stool : Specimen

Camphylobacter coli/jejuni, Escherichia coli : (08) Pathogens
verotoxin positive (VTEC), Salmonella spp, Shigella spp, Yersinia
enterocolitica, Clostridium difficile,Vibrio spp., Aeromonas spp.,

GASTROENTERITIS - VIRAL (90280)

Principle : Real Time PCR
Specimen : Stool

Pathogens (06) : Norovirus G1, Norovirus G2, Adenovirus,
Astrovirus, Rotovirus, Sapovirus

p13 PACKAGE LIST

GASTROENTERITIS - PARASITE (90347)

Principle : Real Time PCR
Specimen : Stool

Pathogens (06) : Giardia lamblia, Entamoeba histolytica,
Cryptosporidium spp, Blastocystis hominis, Dientamoeba fragilis,
Cyclospora cayetanensis

(90348) GASTROENTERITIS - COMBINED

Real Time PCR : Principle
Stool : Specimen

Norovirus GI, Norovirus G2,Rotovirus, Adenovirus : (20)Pathogens
Astrovirus, Sapovirus, Campylobacter coli/jejuni, Clostridium difficile
toxin B, Salmonella spp., EIEC, Shigella spp., Vibrio spp., Yersinia
enterocolitica, Aeromonas spp., Clostridium difficile hypervirulent,
Giardia lamblia, Entamoeba histolytica, Cryptosporidium spp.,
Blastocystis hominis, Dientamoeba fragilis, Cyclospora cayetanensis

RESPIRATORY INFECTIONS - BACTERIAL (90282)

Principle : Real Time PCR
Specimen : Throat/nasal swab/ BAL/ Tracheal Aspirates/ Lung Tissue/ Sputum

Pathogens (12) : Moraxella catarrhalis, Bordetella spp.,
Haemophilus Influenzae, Klebsiella pneumoniae, Legionella spp.,
Salmonella spp., Pneumocystis jirovecii, Streptococcus pneumoniae,
Haemophilus influenzae type B, Staph.aureus, Mycoplasma
pneumoniae, Chlamydia pneumoniae

p14 PACKAGE LIST

RESPIRATORY INFECTIONS – VIRAL (90283)

(ID PANEL -17)
Principle : Real Time PCR
Specimen : Throat/nasal swabs/ BAL/ Tracheal Aspirates/Lung Tissue/ Sputum

Pathogen (20) : Influenza A(flu A), Influenza B (flu B), Rhinovirus,
Coronavirus Nl63, Coronavirus 229E, Coronavirus OC43, Coronavirus
HKU1, Parainfluenza 1, Parainfluenza 2, Parainfluenza 3, Parainfluenza
4, H1N1, Bocavirus, Mycoplasma pneumoniae, Respiratory syncytial
virus A/B, Adenovirus, Enterovirus, Parechovirus, Human
Metapneumovirus A/B, CMV

(90326) RESPIRATORY INFECTIONS - VIRAL

(RIPAER)

Real Time PCR : Principle
Sputum/ Lung Tissue/ Tracheal Aspirates/ BAL / Throat swab/nasal swab : Specimen

Parainfluenza 1, Parainfluenza 2, Parainfluenza 3 : (10) Pathogens
Rhinovirus, Respiratory syncytial virus A/B, Parainfluenza 4,

Influenza A(flu A), Influenza B (flu B), Adenovirus, Enterovirus

RESPIRATORY INFECTIONS - OTHER (90284)

Principle : Real Time PCR
Specimen : Throat/nasal swab/ BAL/ Tracheal Aspirates/ Lung Tissue/ Sputum

Pathogen (01) : Pneumocystis jiroveci

p15 PACKAGE LIST (09199)

GAS (GABHS)

Principle : Real Time PCR
Specimen : Throat Swab

Pathogen (01) : Group A Streptococcus

(90333) BORDETELLA (WOOPING COUGH) PANEL

Real Time PCR : Principle
Throat swab/ Nasal swab/ BAL/ Sputum : Specimen

B.pertussis, B.bronchiseptica, B.parapertussis, : (04) Pathogens
B.holmesii

RESPIRATORY INFECTIONS - FLU (90285)

Principle : Real Time PCR
Specimen : Throat swab /nasal swab / BAL/ Sputum

Pathogens (03) : Influenza A(flu A), H1N1, Influenza B (flu B)

p16 PACKAGE LIST

FLU PANEL (SUBTYPING) (90397)

Principle : Real Time PCR
Specimen : Throat/nasal swabs/ BAL/ Tracheal Aspirates/ Lung Tissue/ Sputum

Pathogens (07) : RSV A, RSV B, FLU A, FLU B, FLU A – H1, FLU B –
H3, FLU A - H1Pdm09

(90287) RESPIRATORY INFECTIONS - HAP

Real time PCR : Principle
Throat swab/Nasal swab/ BAL/ Sputum : Specimen

Klebsiella pneumoniae, Pseudomonas aeruginosa : (03) Pathogens
Acinetobacter spp.,

RESPIRATORY INFECTIONS - CAP I (90288)

Principle : Real Time PCR
Specimen : Throat swab/nasal swab / BAL/ Sputum

Pathogens (07) : Streptococcus pneumoniae, Staph.aureus,
Moraxella catarrhalis, Chlamydia pneumoniae, Haemophilus
influenzae (type B), Bordetella spp.

p17 PACKAGE LIST

RESPIRATORY INFECTIONS - CAP II (90289)

Principle : Real Time PCR
Specimen : Throat swab/nasal swab/ BAL/ Sputum

Pathogens (07) : Haemophilus influenzae type B, Legionella spp.,
Moraxella catarrhalis, Staph.aureus, Streptococcus pneumoniae,
Chlamydia pneumonia, Mycoplasma pneumoniae

RESPIRATORY INFECTIONS - COMBINED I (90290)

Real time PCR : Principle
Throat swab/Nasal swab/ BAL/ Sputum : Specimen

Influenza A (flu A), H1N1, Influenza B (flu B) : (24) Pathogens
Rhinovirus, Coronavirus (Nl63, 229E,Oc43, HKU1), Bocavirus,
Parainfluenza (1, 2, 3, 4), Human Metapneumovirus A/B, Mycoplasma
pneumoniae, Respiratory syncytial virus A/B, Adenovirus, Enterovirus,
Parechovirus, CMV, Streptococcus pneumonia, Chlamydia
pneumoniae, Staphylococcus aureus, Haemophilus influenzae type B

RESPIRATORY INFECTIONS - COMBINED II (90291)

Principle : Real Time PCR
Specimen : Throat swab/Nasal swab/ BAL/ Sputum

Pathogens (28) : Influenza (A,B), H1N1, Rhinovirus, Bocavirus, CMV
Coronavirus (Nl63,229E,oc43,HKU1), Parainfluenza (1, 2, 3, 4,),
Mycoplasma pneumoniae, Respiratory syncytial virus A/B, Adenovirus,
HMV A/B, Enterovirus, Streptococcus pneumonia, Chlamydia pneumoniae,
Staphylococcus aureus, Haemophilus influenzae B, Klebsiella pneumoniae,
Legionella spp., Salmonella spp., Pneumocystis jirovecii, Parechovirus

p18 PACKAGE LIST

RESPIRATORY INFECTIONS - COMBINED III (90292)

Principle : Real time PCR
Specimen : AFB Culture Isolate(Solid / Liquid)/ BAL/ Tracheal Aspirates/ Lung Tissue /Sputum

Pathogens (32) : Influenza (A,B,C), H1N1, Rhinovirus, Bocavirus,

Coronavirus (Nl63, 229E, oc43, HKU1), Parainfluenza (1,2, 3, 4), HMPV A/B,
Mycoplasma pneumoniae, HRSV A/B, Adenovirus, Enterovirus, CM6V,
Parechovirus, pneumococcus, Chlamydia pneumoniae, Staphylococcus aureus,
H.influenza type B, Klebsiella pneumoniae, Bordetella spp, Legionella spp,
Salmonella spp, Pneumocystis jirovecii, Moraxella catarrhalis, Haemophilus
influenzae type B

(90286) RESPIRATORY INFECTIONS - CORONA

Real Time PCR : Principle
Sputum/ BAL / Throat swab/ Nasal swab : Specimen

Coronavirus NL63, Coronavirus 229E : (04) Pathogens
Coronavirus OC43, Coronavirus HKU1,

Gene Xpert (MTB/RIF) assay (90167)

Principle : Real time PCR
Specimen : Sputum (Direct & NALC Processed)/ CSF/ Pleural Fluids/ Urine/

Bronchial washing (BAL)/ Tissue /AFB Culture Fluid (Solid & Liquid)

Pathogens (02) : Mycobacterium tuberculosis(MTB) With
Rifampicin drug susceptibility pattern

p19 PACKAGE LIST

MDR Susceptibility PCR (MCA) (90322)

Principle : Real time PCR (DPOTM and TOCETM Technology)
Specimen : AFB Culture Isolate(Solid / Liquid)/ BAL/ Tracheal Aspirates/ Lung Tissue /Sputum

Pathogens (04) : Mycobacterium tuberculosis with Rifampicin &
Isoniazid drug susceptibility patterns

(90324) XDR Susceptibility (PCR) MCA

Real time PCR (DPOTM and TOCETM Technology) : Principle
AFB Culture Isolate(Solid / Liquid)/ BAL/ Tracheal Aspirates/ Lung Tissue /Sputum : Specimen

Mycobacterium tuberculosis with Fluoroquinolone : (06) Pathogens
Amikacin, Kanamycin & Capreomycin drug susceptibility patterns,
XDR

MDR/XDR Susceptibility (PCR) MCA (90325)

Principle : Real time PCR(DPOTM & TOCETM Technology)
Specimen : AFB Culture Isolate(Solid / Liquid)/ BAL/ Tracheal Aspirates/ Lung Tissue /Sputum

Pathogens (09) : Mycobacterium tuberculosis with Rifampicin,
Isoniazid, & Fluoroquinolone, Amikacin, Kanamycin, Capreomycin
drug susceptibility patterns, MDR & XDR

p20 PACKAGE LIST

MTB/MOTT DNA PCR (90226)

Principle : Real time PCR (DPOTM and TOCETM Technology)
Specimen : AFB Culture Isolate(Solid / Liquid)/ BAL/ Tracheal Aspirates/ Lung Tissue /Sputum

Pathogens (02) : Mycobacterium tuberculosis(MTB) & Atypical
Mycobacteria(MOTT)

(90294) EYE INFECTION

Real time PCR : Principle
Eye Swab : Specimen

HSV1, VZV, HSV2, Chlamydia trachomatis : (05) Pathogens
Adenovirus

DERMATOPHYTES (90295)

Principle : Real Time PCR
Specimen : Skin scale/ Plucked hair/ Nails/ Culture or swab/ Blood/ CSF

Pathogens (07) : T.mentagrophytes complex, T.tonsurans
T.violaceum, T.rubrum complex, M.canis, M.audouinii, M.ferrugineum

p21 PACKAGE LIST

PAN FUNGAL DNA (90307)

Principle : Real Time PCR
Specimen : Skin scale/ Plucked hair/ Nails/ Culture or swab/ Blood/ CSF

Pathogens : All Fungus

Histoplasma capsulatum

Real time PCR : Principle
Any Body Fluid : Specimen

Histoplasma capsulatum : (01) Pathogen

Blastomyces dermatidis

Principle : Real Time PCR
Specimen : Any Body Fluid

Pathogen (01) : Blastomyces dermatidis

p22 PACKAGE LIST

BLOOD BANK ID SCREEN PANEL (VIRAL) (90346)

Principle : Real Time PCR
Specimen : Blood /Plasma

Pathogens(03) : HCV RNA, HBV DNA, HIV -1 RNA Qualitative

(90293) INFECTIONS OF THE IMMUNOSUPPRESSED

Real time PCR : Principle
Blood : Specimen

Epstein – barr virus, Cytomegalovirus, BK virus : (03) Pathogens
(Qualitative & Quantitative)

HBV DNA QUANTITATIVE (90265)

Principle : Real Time PCR
Specimen : Plasma

Pathogen (01) : Hepatitis B Virus

p23 PACKAGE LIST (09038)

HBV DNA QUALITATIVE

Principle : Real Time PCR
Specimen : Plasma

Pathogen (01) : Hepatitis B Virus

(90267) HCV RNA QUANTITATIVE

Real Time PCR : Principle
Plasma : Specimen

Hepatitis C Virus : (01) Pathogen

HCV RNA QUALITATIVE (09039)

Principle : Real Time PCR
Specimen : Plasma

Pathogen (01) : Hepatitis C Virus

p24 PACKAGE LIST

HIV 1 RNA QUANTITATIVE (90266)

Principle : Real Time PCR
Specimen : Plasma

Pathogen (01) : Human Immunodeficiency Virus Type I (HIV-1)

(09037) HIV 1 RNA QUALITATIVE

Real Time PCR : Principle
Plasma : Specimen

Human Immunodeficiency Virus Type I (HIV-1) : (01) Pathogen

BKV DNA QUANTITATIVE (09185/09186)

Principle : Real Time PCR
Specimen : Plasma/ Urine

Pathogen (01) : BK Virus (Polyoma Virus)

p25 PACKAGE LIST (09030)

CMV DNA QUANTITATIVE

Principle : Real Time PCR
Specimen : Plasma/ Fluid/ Tissue

Pathogen (01) : Cytomegalovirus (CMV)

(09319) CMV DNA QUALITATIVE

Real Time PCR : Principle
Plasma : Specimen

Cytomegalovirus (CMV) : (01) Pathogen

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